When using the mark as paid feature in AutoEntry and publishing to Xero, the setting for how the invoices are published to Xero must be set to 'Awaiting Payment' under the integration to Xero:

The payment will not process through to Xero if Draft or Awaiting Approval is selected. 

While integrated with Xero and publishing invoices as paid, there are two options available of where to publish these invoices across to Xero:

If the publish to is selected as "Purchases", AutoEntry will create the purchase/bill and a spend money transaction against this purchase/bill.

If the publish to is selected as "Bank Account", AutoEntry will bypass Accounts Payable and instead immediately create a spend money transaction.

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